STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WASHC1WASH complex subunit 1. (463 aa)    
Predicted Functional Partners:
WASHC3
WASH complex subunit 3.
    
 0.963
WASHC5
WASH complex subunit 5.
   
 0.875
WASHC4
WASH complex subunit 4.
    
 0.816
G1LM50_AILME
CAP-ZIP_m domain-containing protein.
    
 
 0.772
VPS35
VPS35 retromer complex component.
    
 
 0.637
ARPC5
Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
     
 0.570
BRK1
Uncharacterized protein.
     
 0.569
CCDC93
Coiled-coil domain containing 93.
    
 
 0.527
HR
HR lysine demethylase and nuclear receptor corepressor.
      
 0.521
FMN1
Formin 1.
    
 0.518
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.