STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA13Uncharacterized protein. (2396 aa)    
Predicted Functional Partners:
G1LDK0_AILME
Uncharacterized protein.
 
     0.810
TRIP12
Thyroid hormone receptor interactor 12.
     
 0.561
CMTM2
CKLF like MARVEL transmembrane domain containing 2.
  
    0.523
G1LDI8_AILME
ABC transporter domain-containing protein.
 
     0.519
ABCC6
ATP binding cassette subfamily C member 6.
   
 0.519
BPIFA2
BPI1 domain-containing protein.
  
     0.467
FSIP2
Uncharacterized protein.
  
 
   0.428
FAM216B
Family with sequence similarity 216 member B.
  
   
 0.420
NR1H4
Nuclear receptor subfamily 1 group H member 4.
    
 0.416
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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