STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAC3SH3 and cysteine rich domain 3. (364 aa)    
Predicted Functional Partners:
PRSS27
Serine protease 27; Belongs to the peptidase S1 family.
      
 0.608
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 
 0.543
RCL1
RNA terminal phosphate cyclase like 1.
      
 0.530
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.521
CACNA1S
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
 
 0.521
G1LV68_AILME
SCAN box domain-containing protein.
    
 
 0.516
GRINA
Glutamate ionotropic receptor NMDA type subunit associated protein 1.
      
 0.510
PTPRR
Protein tyrosine phosphatase receptor type R.
      
 0.507
SLC6A7
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.499
G1L564_AILME
Uncharacterized protein.
      
 0.476
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.