STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A6Collagen type VI alpha 6 chain. (2267 aa)    
Predicted Functional Partners:
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
    
 0.535
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.513
G1L4F6_AILME
Uncharacterized protein.
   
0.496
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.490
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.479
LAMC3
Laminin subunit gamma 3.
   
 0.477
RBM41
RNA binding motif protein 41.
      
 0.449
P3H2
Prolyl 3-hydroxylase 2.
   
 0.448
BCL2L14
BCL2 like 14.
      
 0.444
PRORP
PRORP domain-containing protein.
    
 
 0.443
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.