STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYB561D1Cytochrome b561 family member D1. (229 aa)    
Predicted Functional Partners:
BCCIP
BRCA2 and CDKN1A-interacting protein; May promote cell cycle arrest by enhancing the inhibition of CDK2 activity by CDKN1A. May be required for repair of DNA damage by homologous recombination in conjunction with BRCA2. May not be involved in non-homologous end joining (NHEJ); Belongs to the BCP1 family.
    
 
 0.749
SNX22
Sorting nexin 22.
      
 0.727
EFNA4
Ephrin A4; Belongs to the ephrin family.
      
 0.625
SUOX
Sulfite oxidase.
      
 0.620
GTF2A2
General transcription factor IIA subunit 2.
     
 0.609
PTTG1IP
PTTG1 interacting protein.
      
 0.587
POLR3K
RNA polymerase III subunit K; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.556
TCF12
Transcription factor 12.
    
 0.541
BAG3
BCL2 associated athanogene 3.
    
 0.493
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
      
 0.448
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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