STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITFG1Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.609
TMEM179B
Transmembrane protein 179B.
      
 0.592
PRPSAP2
Phosphoribosyl pyrophosphate synthetase associated protein 2.
    
 
 0.545
TM7SF3
Transmembrane 7 superfamily member 3.
      
 0.545
LY6G6C
Lymphocyte antigen 6 family member G6C.
      
 0.521
FSIP1
Fibrous sheath interacting protein 1.
      
 0.514
ASCC2
Activating signal cointegrator 1 complex subunit 2.
      
 0.507
PRKG1
Protein kinase cGMP-dependent 1; Belongs to the protein kinase superfamily.
    
 
 0.489
CTNNBL1
Catenin beta like 1.
      
 0.455
ATP8A1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.455
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.