STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R3HDM2Uncharacterized protein. (1045 aa)    
Predicted Functional Partners:
PRSS27
Serine protease 27; Belongs to the peptidase S1 family.
      
 0.536
RYR1
Ryanodine receptor 1.
   
  
 0.466
RCL1
RNA terminal phosphate cyclase like 1.
      
 0.459
G1LV68_AILME
SCAN box domain-containing protein.
    
 
 0.435
KLHL40
Kelch like family member 40.
   
 
 0.423
POLR3B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.418
MAB21L3
Mab-21 like 3.
   
   0.412
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.407
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.406
PRSS50
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.400
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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