STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC119Unc-119 lipid binding chaperone. (190 aa)    
Predicted Functional Partners:
ARL3
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.931
PANDA_016472
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.931
ARL2
ARL2-SNX15 readthrough (NMD candidate); Belongs to the small GTPase superfamily. Arf family.
    
 
 0.901
SUN1
Sad1 and UNC84 domain containing 1.
      
 0.750
ACAD11
TPR_REGION domain-containing protein.
    
 0.750
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.746
ARL13A
ADP ribosylation factor like GTPase 13A.
    
 
 0.651
RP2
RP2 activator of ARL3 GTPase.
     
 0.638
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
  
   
 0.610
BRD7
Bromodomain containing 7.
      
 0.605
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.