STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR19Proline rich 19. (357 aa)    
Predicted Functional Partners:
CCDC73
Coiled-coil domain containing 73.
      
 0.603
C3orf70
Chromosome 3 open reading frame 70.
      
 0.603
G1M9K5_AILME
PDZ domain-containing protein.
      
 0.533
SLC26A11
Solute carrier family 26 member 11.
      
 0.513
PAFAH1B3
Platelet activating factor acetylhydrolase 1b catalytic subunit 3.
      
 0.512
FNDC8
Fibronectin type III domain containing 8.
  
     0.511
FAM133B
Family with sequence similarity 133 member B.
      
 0.505
FAM133A
Family with sequence similarity 133 member A.
      
 0.505
SGSH
N-sulfoglucosamine sulfohydrolase.
      
 0.495
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
      
 0.485
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.