G1LEA7_AILME protein (Ailuropoda melanoleuca)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

G1LEA7_AILME

Homeobox domain-containing protein. (235 aa)

Predicted Functional Partners:

HOXB7

0.668

HOXB6

0.641

HOXC5

0.483

HOXC4

0.483

HOXA6

0.482

HOXB2

0.471

HOXA2

0.471

HOXA7

0.466

HOXB3

0.451

PBX2

0.450

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G1LEA7_AILME	HOXA2	ENSAMEP00000005241	ENSAMEP00000006239	Homeobox domain-containing protein.	Homeobox A2.	0.471
G1LEA7_AILME	HOXA6	ENSAMEP00000005241	ENSAMEP00000006213	Homeobox domain-containing protein.	Homeobox A6.	0.482
G1LEA7_AILME	HOXA7	ENSAMEP00000005241	ENSAMEP00000006205	Homeobox domain-containing protein.	Homeobox A7.	0.466
G1LEA7_AILME	HOXB2	ENSAMEP00000005241	ENSAMEP00000005216	Homeobox domain-containing protein.	Homeobox B2.	0.471
G1LEA7_AILME	HOXB3	ENSAMEP00000005241	ENSAMEP00000005226	Homeobox domain-containing protein.	Homeobox B3.	0.451
G1LEA7_AILME	HOXB6	ENSAMEP00000005241	ENSAMEP00000005252	Homeobox domain-containing protein.	Homeobox B6.	0.641
G1LEA7_AILME	HOXB7	ENSAMEP00000005241	ENSAMEP00000005257	Homeobox domain-containing protein.	Homeobox B7.	0.668
G1LEA7_AILME	HOXC4	ENSAMEP00000005241	ENSAMEP00000000728	Homeobox domain-containing protein.	Homeobox C4.	0.483
G1LEA7_AILME	HOXC5	ENSAMEP00000005241	ENSAMEP00000000722	Homeobox domain-containing protein.	Homeobox C5.	0.483
G1LEA7_AILME	PBX2	ENSAMEP00000005241	ENSAMEP00000002651	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.450
HOXA2	G1LEA7_AILME	ENSAMEP00000006239	ENSAMEP00000005241	Homeobox A2.	Homeobox domain-containing protein.	0.471
HOXA6	G1LEA7_AILME	ENSAMEP00000006213	ENSAMEP00000005241	Homeobox A6.	Homeobox domain-containing protein.	0.482
HOXA6	HOXA7	ENSAMEP00000006213	ENSAMEP00000006205	Homeobox A6.	Homeobox A7.	0.947
HOXA6	HOXB6	ENSAMEP00000006213	ENSAMEP00000005252	Homeobox A6.	Homeobox B6.	0.816
HOXA6	HOXB7	ENSAMEP00000006213	ENSAMEP00000005257	Homeobox A6.	Homeobox B7.	0.917
HOXA6	HOXC4	ENSAMEP00000006213	ENSAMEP00000000728	Homeobox A6.	Homeobox C4.	0.799
HOXA6	HOXC5	ENSAMEP00000006213	ENSAMEP00000000722	Homeobox A6.	Homeobox C5.	0.963
HOXA7	G1LEA7_AILME	ENSAMEP00000006205	ENSAMEP00000005241	Homeobox A7.	Homeobox domain-containing protein.	0.466
HOXA7	HOXA6	ENSAMEP00000006205	ENSAMEP00000006213	Homeobox A7.	Homeobox A6.	0.947
HOXA7	HOXB6	ENSAMEP00000006205	ENSAMEP00000005252	Homeobox A7.	Homeobox B6.	0.823