STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB8Homeobox B8. (245 aa)    
Predicted Functional Partners:
HOXB5
Homeobox B5.
  
  
0.828
HOXB7
Homeobox B7.
   
 
0.798
HOXB6
Homeobox B6.
   
 
0.774
HOXB9
Homeobox B9.
   
 
0.744
RTF2
Replication termination factor 2.
      
 0.609
PBX1
PBX homeobox 1.
    
 0.520
G1MDY6_AILME
Homeobox domain-containing protein.
    
 0.520
PBX2
Homeobox domain-containing protein.
    
 0.511
G1LMH8_AILME
Homeobox domain-containing protein.
    
 0.511
SLITRK5
SLIT and NTRK like family member 5.
    
 
 0.511
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.