STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB9Homeobox B9. (247 aa)    
Predicted Functional Partners:
HOXB8
Homeobox B8.
   
 
0.744
HOXB6
Homeobox B6.
   
 
0.685
HOXB7
Homeobox B7.
   
 
0.644
HAND2
Heart and neural crest derivatives expressed 2.
    
 
 0.613
HOXB5
Homeobox B5.
   
 
0.604
HOXC6
Homeobox C6.
   
 
0.487
SIMC1
SUMO interacting motifs containing 1.
      
 0.479
PHF1
PHD finger protein 1.
    
 
 0.464
UFSP2
UFM1 specific peptidase 2.
      
 0.463
RBPMS
RNA binding protein, mRNA processing factor.
      
 0.444
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.