STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTNSMB domain-containing protein. (470 aa)    
Predicted Functional Partners:
SERPINE1
Serpin family E member 1; Belongs to the serpin family.
   
 0.995
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.992
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
    
 0.984
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
   
 0.983
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.979
ITGB8
Integrin beta.
    
 0.978
ITGAV
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.976
ITGA2B
Integrin subunit alpha 2b; Belongs to the integrin alpha chain family.
   
 0.963
PLAUR
Plasminogen activator, urokinase receptor.
    
 
 0.932
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.924
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.