STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LANCL1LanC like 1. (399 aa)    
Predicted Functional Partners:
ROGDI
Rogdi atypical leucine zipper.
      
 0.750
SMYD4
SET and MYND domain containing 4.
      
 0.750
STYXL1
Serine/threonine/tyrosine interacting like 1.
      
 0.747
COPS7A
COP9 signalosome subunit 7A.
      
 0.727
ERI3
ERI1 exoribonuclease family member 3.
      
 0.718
ALDH16A1
Aldehyde dehydrogenase 16 family member A1.
    
 
 0.625
PRPF31
Pre-mRNA processing factor 31.
      
 0.571
ACOX2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
  
 0.530
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.529
SRCIN1
SRC kinase signaling inhibitor 1.
      
 0.527
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.