STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP6V1FNBATP6V1F neighbor. (176 aa)    
Predicted Functional Partners:
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
      
 0.836
CST11
Cystatin 11.
      
 0.776
GCAT
Glycine C-acetyltransferase.
      
 0.751
CCDC127
Coiled-coil domain containing 127.
      
 0.680
C6orf58
Chromosome 6 open reading frame 58.
      
 0.607
G1L095_AILME
DUF4821 domain-containing protein.
      
 0.530
CFAP61
Uncharacterized protein.
      
 0.530
TEKT5
Tektin 5.
      
 0.527
LOC100481626
Uncharacterized protein.
      
 0.518
LOC105234503
Uncharacterized protein.
      
 0.507
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.