STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMOC2SPARC related modular calcium binding 2. (433 aa)    
Predicted Functional Partners:
OLFM4
Olfactomedin 4.
      
 0.749
MSI1
Musashi RNA binding protein 1.
   
  
 0.615
PAX3
Paired box 3.
      
 0.542
BMP3
Bone morphogenetic protein 3.
      
 0.540
ASCL2
Achaete-scute family bHLH transcription factor 2.
   
  
 0.497
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.495
CCDC3
Coiled-coil domain containing 3.
   
  
 0.478
GSK3B
Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily.
    
 
 0.466
GNG4
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.459
FBXO38
F-box protein 38.
      
 0.450
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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