Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYRM9Uncharacterized protein; Belongs to the complex I LYR family. (78 aa)    
Predicted Functional Partners:
LYRM2
LYR motif containing 2; Belongs to the complex I LYR family.
      
 0.649
LYRM1
LYR motif containing 1; Belongs to the complex I LYR family.
      
 0.648
GRIFIN
Galectin.
      
 0.569
WSB1
WD repeat and SOCS box containing 1.
      
 0.558
LYRM7
LYR motif containing 7; Belongs to the complex I LYR family.
      
 0.537
LGALSL
Galectin.
      
 0.521
METTL1
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
  
 0.494
GTF2E2
General transcription factor IIE subunit 2.
      
 0.490
HELZ
Helicase with zinc finger.
      
 0.490
LGALS1
Galectin.
      
 0.489
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.