STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTC1Actin alpha cardiac muscle 1; Belongs to the actin family. (377 aa)    
Predicted Functional Partners:
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.964
TPM4
Tropomyosin 4; Belongs to the tropomyosin family.
   
 0.964
TPM3
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.964
TPM2
Uncharacterized protein.
   
 0.944
MYL4
Myosin light chain 4.
   
 0.935
TNNI3
Troponin I3, cardiac type.
   
 0.934
TNNT2
Troponin T2, cardiac type.
   
 0.929
MYH7
Myosin heavy chain 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.896
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.798
ITSN2
Intersectin 2.
     
 0.689
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.