STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD42ANK_REP_REGION domain-containing protein. (469 aa)    
Predicted Functional Partners:
ANKRD42-2
Ankyrin repeat domain 42.
 
     0.900
IQUB
IQ motif and ubiquitin domain containing.
   
 
 0.822
DNAAF1
Dynein assembly factor 1, axonemal.
   
  0.817
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 
 0.763
CCDC90B
Coiled-coil domain containing 90B.
      
 0.761
RAB30
RAB30, member RAS oncogene family.
      
 0.692
LOC109488685
Uncharacterized protein.
   
    0.654
LOC105235137
Uncharacterized protein.
   
    0.654
BOLA1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.632
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 
 0.616
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.