STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4orf47Chromosome 4 open reading frame 47. (312 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.877
C9orf116
Chromosome 9 open reading frame 116.
      
 0.859
ARMC3
Armadillo repeat containing 3.
   
  
 0.859
IQUB
IQ motif and ubiquitin domain containing.
      
 0.849
C5orf49
Chromosome 5 open reading frame 49.
   
  
 0.769
G1LNW0_AILME
DUF4201 domain-containing protein.
    
 0.757
G1LB89_AILME
Uncharacterized protein.
    
 0.618
CCDC170
Coiled-coil domain containing 170.
    
 0.618
CCDC40
Coiled-coil domain containing 40.
      
 0.512
GNB2
G protein subunit beta 2.
    
 0.505
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.