STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUNX1Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. (426 aa)    
Predicted Functional Partners:
PML
Promyelocytic leukemia.
   
 0.914
PTPN11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 
 0.907
CBFB
Core-binding factor subunit beta.
    
 0.864
G1LRM7_AILME
Uncharacterized protein.
 
      0.713
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.690
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.683
ETS1
ETS proto-oncogene 1, transcription factor.
   
 0.680
GATA2
GATA binding protein 2.
    
 0.623
CCND3
Cyclin D3; Belongs to the cyclin family.
   
 0.605
CCND2
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.605
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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