STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRBP1Ribosome binding protein 1. (1597 aa)    
Predicted Functional Partners:
LEMD2
LEM domain containing 2.
   
 0.758
IGBP1
Uncharacterized protein.
    
 
 0.703
SLC35A2
Solute carrier family 35 member A2.
      
 0.693
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.691
SPCS2
Signal peptidase complex subunit 2.
   
 
 0.691
ACO1
Aconitase 1; Belongs to the aconitase/IPM isomerase family.
      
 0.650
SEC23B
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 
 0.632
SAR1A
Secretion associated Ras related GTPase 1A; Belongs to the small GTPase superfamily. SAR1 family.
   
  
 0.619
DEF8
Differentially expressed in FDCP 8 homolog.
      
 0.614
MDC1
Mediator of DNA damage checkpoint 1.
    
 0.605
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.