STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1LFH8_AILMEUncharacterized protein. (178 aa)    
Predicted Functional Partners:
VPS13A
Uncharacterized protein.
 
      0.900
LGALS12
Galectin.
   
 
 0.651
VAPA
VAMP associated protein A.
    
 
 0.544
PLA2G15
Phospholipase A2 group XV.
      
 0.526
DCAF17
DDB1 and CUL4 associated factor 17.
      
 0.516
PSD3
Pleckstrin and Sec7 domain containing 3.
      
 0.461
BBOF1
Basal body orientation factor 1.
   
  
 0.451
TMEM161B
Transmembrane protein 161B.
      
 0.449
GGPS1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
      
 0.448
EHBP1L1
EH domain binding protein 1 like 1.
   
  
 0.447
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.