STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100476226IF rod domain-containing protein; Belongs to the intermediate filament family. (458 aa)    
Predicted Functional Partners:
NFAM1
Uncharacterized protein.
      
 0.711
G1LBM0_AILME
Uncharacterized protein.
   
  
 0.589
KRTAP8-1
Keratin associated protein 8-1.
   
  
 0.577
KRTAP11-1
Keratin associated protein 11-1.
   
  
 0.563
DSG4
Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.555
KRTAP3-1
Keratin associated protein 3-1.
   
  
 0.552
PRORP
PRORP domain-containing protein.
      
 0.449
STARD9
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.449
AAMDC
Adipogenesis associated Mth938 domain containing.
      
 0.438
KRT82
Keratin 82; Belongs to the intermediate filament family.
  
0.413
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.