STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD18Potassium channel tetramerization domain containing 18. (409 aa)    
Predicted Functional Partners:
C2orf69
Chromosome 2 open reading frame 69.
   
  
 0.595
APEH
Acylaminoacyl-peptide hydrolase.
   
  
 0.588
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
   
 
 0.542
FAM234A
Family with sequence similarity 234 member A.
      
 0.530
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.529
ARHGAP1
Rho GTPase activating protein 1.
      
 0.529
CD99L2
CD99 molecule like 2.
      
 0.529
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.526
L3HYPDH
Trans-L-3-hydroxyproline dehydratase.
      
 0.523
FAM135B
Family with sequence similarity 135 member B.
      
 0.523
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.