STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100472566ABC transmembrane type-1 domain-containing protein. (551 aa)    
Predicted Functional Partners:
G1M2Z0_AILME
ABC transporter domain-containing protein.
 
     0.939
ABCD3
ATP binding cassette subfamily D member 3.
  
0.837
PEX3
Peroxisomal biogenesis factor 3.
   
 0.646
PEX13
Peroxisomal biogenesis factor 13.
   
 
 0.604
PEX14
Peroxisomal biogenesis factor 14.
   
 0.584
PEX12
Peroxisomal biogenesis factor 12.
   
 
 0.570
SLC25A17
Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.557
ABCD4
ATP binding cassette subfamily D member 4.
   
0.553
HNF1A
HNF1 homeobox A.
      
 0.544
PEX16
Peroxisomal membrane protein PEX16.
     
 0.534
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.