STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAT1Adenosine deaminase tRNA specific 1. (496 aa)    
Predicted Functional Partners:
ADAT2
Adenosine deaminase tRNA specific 2.
      
 0.746
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.603
PTPA
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
  
 0.592
TRUB1
TruB pseudouridine synthase family member 1.
   
  
 0.565
QPCTL
Glutaminyl-peptide cyclotransferase like.
   
  
 0.550
SLC30A9
Solute carrier family 30 member 9.
      
 0.534
SPAG6
Sperm associated antigen 6.
      
 0.531
C1orf185
Chromosome 1 open reading frame 185.
      
 0.531
ZNF414
Zinc finger protein 414.
    
 
 0.523
QPCT
Glutaminyl-peptide cyclotransferase.
   
  
 0.506
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.