STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1LFV7_AILMEIF rod domain-containing protein; Belongs to the intermediate filament family. (453 aa)    
Predicted Functional Partners:
KRT4
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.664
G1L3G2_AILME
Ubiquitin_3 domain-containing protein.
   
 0.585
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.579
KRT19
Keratin 19; Belongs to the intermediate filament family.
   
  0.564
GPR157
G protein-coupled receptor 157.
      
 0.553
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
    
 0.552
AK9
Uncharacterized protein.
    
 0.531
HABP2
Hyaluronan binding protein 2.
   
 0.518
G1L4L4_AILME
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.443
G1LHX2_AILME
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.443
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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