STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSMEM1Serine rich single-pass membrane protein 1. (243 aa)    
Predicted Functional Partners:
SPACA1
Sperm acrosome associated 1.
      
 0.737
TSSK4
Testis specific serine kinase 4.
      
 0.717
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
      
 0.717
KSR2
Kinase suppressor of ras 2.
      
 0.716
SPATA46
Spermatogenesis associated 46.
      
 0.699
CIB4
Calcium and integrin binding family member 4.
      
 0.694
CPA5
Carboxypeptidase A5.
      
 0.682
ZP4
Zona pellucida glycoprotein 4.
      
 0.642
VPS54
VPS54 subunit of GARP complex.
      
 0.605
KLC3
Kinesin light chain 3.
      
 0.599
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.