STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCM1Glial cells missing transcription factor 1. (435 aa)    
Predicted Functional Partners:
GCM2
Glial cells missing transcription factor 2.
  
  
0.909
VASH2
Vasohibin 2.
      
 0.524
ASCL2
Achaete-scute family bHLH transcription factor 2.
   
  
 0.521
ELF5
E74 like ETS transcription factor 5.
      
 0.517
EOMES
Eomesodermin.
   
  
 0.517
PCDH12
Protocadherin 12.
      
 0.515
DLX3
Distal-less homeobox 3.
   
 
 0.506
ESRRB
Estrogen related receptor beta.
   
 
 0.497
KLF6
Kruppel like factor 6.
    
 
 0.450
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.447
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.