STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASP2Caspase 2; Belongs to the peptidase C14A family. (452 aa)    
Predicted Functional Partners:
PIDD1
P53-induced death domain protein 1.
    
 0.960
BID
BH3-interacting domain death agonist; Counters the protective effect of Bcl-2.
   
 0.948
APAF1
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
    
 0.857
XIAP
X-linked inhibitor of apoptosis.
   
 0.729
BCL2
BCL2 apoptosis regulator.
   
 0.687
CYCS
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.685
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.680
GABPB1
GA binding protein transcription factor subunit beta 1.
    
  0.678
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
0.672
CENPN
Centromere protein N.
   
 0.666
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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