STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN15Calpain 15; Belongs to the peptidase C2 family. (1066 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
 0.740
CAST
Calpastatin.
   
 0.655
ANKRD49
Ankyrin repeat domain 49.
    
 0.560
ITSN2
Intersectin 2.
   
 
  0.546
WDCP
WD repeat and coiled coil containing.
      
 0.512
ZSWIM8
Zinc finger SWIM-type containing 8.
      
 0.499
KCTD10
Potassium channel tetramerization domain containing 10.
    
 
 0.478
MAMLD1
Uncharacterized protein.
    
 
 0.474
SLC25A19
Solute carrier family 25 member 19; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.457
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.450
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.