STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1LPZ8_AILMEUncharacterized protein. (188 aa)    
Predicted Functional Partners:
XPO1
Exportin 1.
   
 0.789
NUP214
Nucleoporin 214.
     
 0.722
G1LVB8_AILME
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.676
G1M4E6_AILME
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.676
SET
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.676
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.582
H2AZ2
Histone H2A; Belongs to the histone H2A family.
   
 
 0.582
TRAPPC6A
Trafficking protein particle complex 6A.
      
 0.522
DDX17
DEAD-box helicase 17; Belongs to the DEAD box helicase family.
   
 
 0.518
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.506
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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