STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM44Transmembrane protein 44. (439 aa)    
Predicted Functional Partners:
LSG1
Large 60S subunit nuclear export GTPase 1.
      
 0.517
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
      
 0.512
DPF3
Double PHD fingers 3.
      
 0.481
PPP1R18
Protein phosphatase 1 regulatory subunit 18.
      
 0.461
G1L926_AILME
RUN domain-containing protein.
      
 0.457
DPYSL5
Dihydropyrimidinase like 5.
      
 0.450
RASSF8
Ras association domain family member 8.
      
 0.450
RHOBTB2
Rho related BTB domain containing 2.
      
 0.437
NOP53
NOP53 ribosome biogenesis factor.
      
 0.437
SULT1C2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.435
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.