STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP7Matrix metallopeptidase 7. (267 aa)    
Predicted Functional Partners:
SPP1
Secreted phosphoprotein 1.
     
 0.879
OPTC
Opticin.
    
 0.848
CD44
CD44 molecule (Indian blood group).
   
 0.843
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.811
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.790
DCN
Decorin; May affect the rate of fibrils formation.
    
 0.771
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.766
CTSV
Cathepsin V; Belongs to the peptidase C1 family.
   
 0.763
MMP20
Matrix metallopeptidase 20.
  
0.762
MMP2
Matrix metallopeptidase 2.
   
0.755
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.