STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHPN1Rhophilin Rho GTPase binding protein 1. (658 aa)    
Predicted Functional Partners:
TTLL1
Tubulin tyrosine ligase like 1.
      
 0.834
TEKT4
Uncharacterized protein.
   
  
 0.813
DCDC2B
Doublecortin domain containing 2B.
   
    0.813
SH3RF2
SH3 domain containing ring finger 2.
   
 
 0.733
TRAPPC12
Trafficking protein particle complex 12.
      
 0.696
RHOD
Ras homolog family member D.
    
 0.653
CHMP5
Charged multivesicular body protein 5.
    
 0.625
LMNTD2
Lamin tail domain containing 2.
   
 
 0.624
ADCYAP1R1
ADCYAP receptor type I; Belongs to the G-protein coupled receptor 2 family.
      
 0.623
NPNT
Nephronectin.
      
 0.615
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.