STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLPBPPyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6. (320 aa)    
Predicted Functional Partners:
PDXK
Pyridoxal kinase.
  
  
 0.888
LACC1
Uncharacterized protein.
  
  
 0.844
PDXP
Uncharacterized protein.
     
 0.717
RASSF4
Ras association domain family member 4.
      
 0.640
ERLIN2
ER lipid raft associated 2.
 
    
 0.627
LSM1
U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.
      
 0.609
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.603
LRRC59
Leucine rich repeat containing 59.
      
 0.603
DDHD2
DDHD domain containing 2.
      
 0.591
PIPOX
Pipecolic acid and sarcosine oxidase.
    
 0.587
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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