Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASTOR1 | ZC2HC1B | ENSAMEP00000008288 | ENSAMEP00000012092 | Cytosolic arginine sensor for mTORC1 subunit 1. | Zinc finger C2HC-type containing 1B. | 0.463 |
FAM163B | LRRTM2 | ENSAMEP00000012120 | ENSAMEP00000020325 | Family with sequence similarity 163 member B. | Leucine rich repeat transmembrane neuronal 2. | 0.603 |
FAM163B | SEC22C | ENSAMEP00000012120 | ENSAMEP00000013191 | Family with sequence similarity 163 member B. | SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. | 0.691 |
FAM163B | THNSL2 | ENSAMEP00000012120 | ENSAMEP00000010582 | Family with sequence similarity 163 member B. | Threonine synthase like 2. | 0.435 |
FAM163B | ZC2HC1B | ENSAMEP00000012120 | ENSAMEP00000012092 | Family with sequence similarity 163 member B. | Zinc finger C2HC-type containing 1B. | 0.741 |
FAM163B | ZDHHC22 | ENSAMEP00000012120 | ENSAMEP00000019406 | Family with sequence similarity 163 member B. | Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. | 0.725 |
LRRTM2 | FAM163B | ENSAMEP00000020325 | ENSAMEP00000012120 | Leucine rich repeat transmembrane neuronal 2. | Family with sequence similarity 163 member B. | 0.603 |
LRRTM2 | SEC22C | ENSAMEP00000020325 | ENSAMEP00000013191 | Leucine rich repeat transmembrane neuronal 2. | SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. | 0.534 |
LRRTM2 | ZC2HC1B | ENSAMEP00000020325 | ENSAMEP00000012092 | Leucine rich repeat transmembrane neuronal 2. | Zinc finger C2HC-type containing 1B. | 0.603 |
LRRTM2 | ZDHHC22 | ENSAMEP00000020325 | ENSAMEP00000019406 | Leucine rich repeat transmembrane neuronal 2. | Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. | 0.588 |
SEC22C | FAM163B | ENSAMEP00000013191 | ENSAMEP00000012120 | SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. | Family with sequence similarity 163 member B. | 0.691 |
SEC22C | LRRTM2 | ENSAMEP00000013191 | ENSAMEP00000020325 | SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. | Leucine rich repeat transmembrane neuronal 2. | 0.534 |
SEC22C | ZC2HC1B | ENSAMEP00000013191 | ENSAMEP00000012092 | SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. | Zinc finger C2HC-type containing 1B. | 0.691 |
SEC22C | ZDHHC22 | ENSAMEP00000013191 | ENSAMEP00000019406 | SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. | Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. | 0.689 |
THNSL2 | FAM163B | ENSAMEP00000010582 | ENSAMEP00000012120 | Threonine synthase like 2. | Family with sequence similarity 163 member B. | 0.435 |
THNSL2 | ZC2HC1B | ENSAMEP00000010582 | ENSAMEP00000012092 | Threonine synthase like 2. | Zinc finger C2HC-type containing 1B. | 0.435 |
ZC2HC1B | CASTOR1 | ENSAMEP00000012092 | ENSAMEP00000008288 | Zinc finger C2HC-type containing 1B. | Cytosolic arginine sensor for mTORC1 subunit 1. | 0.463 |
ZC2HC1B | FAM163B | ENSAMEP00000012092 | ENSAMEP00000012120 | Zinc finger C2HC-type containing 1B. | Family with sequence similarity 163 member B. | 0.741 |
ZC2HC1B | LRRTM2 | ENSAMEP00000012092 | ENSAMEP00000020325 | Zinc finger C2HC-type containing 1B. | Leucine rich repeat transmembrane neuronal 2. | 0.603 |
ZC2HC1B | SEC22C | ENSAMEP00000012092 | ENSAMEP00000013191 | Zinc finger C2HC-type containing 1B. | SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. | 0.691 |
page 1 of 2