STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCPIP1Valosin containing protein interacting protein 1. (1239 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.951
NSFL1C
NSFL1 cofactor.
   
 
 0.948
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.940
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.940
UBXN2B
UBX domain protein 2B.
   
 
 0.936
UBXN7
UBX domain-containing protein 7.
   
 
 0.930
UBXN2A
UBX domain protein 2A.
   
 
 0.923
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
   
 
 0.850
USP40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
    
 
 0.762
USP50
Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family.
      
 0.746
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.