Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNOT7 | DCP1A | ENSAMEP00000014507 | ENSAMEP00000008304 | CCR4-NOT transcription complex subunit 7. | Decapping mRNA 1A. | 0.660 |
CNOT7 | DCP2 | ENSAMEP00000014507 | ENSAMEP00000013264 | CCR4-NOT transcription complex subunit 7. | Decapping mRNA 2. | 0.955 |
CNOT7 | DDX6 | ENSAMEP00000014507 | ENSAMEP00000006421 | CCR4-NOT transcription complex subunit 7. | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | 0.908 |
CNOT7 | PARN | ENSAMEP00000014507 | ENSAMEP00000011860 | CCR4-NOT transcription complex subunit 7. | Poly(A)-specific ribonuclease. | 0.499 |
CNOT7 | XRN1 | ENSAMEP00000014507 | ENSAMEP00000013226 | CCR4-NOT transcription complex subunit 7. | 5'-3' exoribonuclease 1. | 0.471 |
DCP1A | CNOT7 | ENSAMEP00000008304 | ENSAMEP00000014507 | Decapping mRNA 1A. | CCR4-NOT transcription complex subunit 7. | 0.660 |
DCP1A | DCP1B | ENSAMEP00000008304 | ENSAMEP00000004378 | Decapping mRNA 1A. | Decapping mRNA 1B. | 0.992 |
DCP1A | DCP2 | ENSAMEP00000008304 | ENSAMEP00000013264 | Decapping mRNA 1A. | Decapping mRNA 2. | 0.998 |
DCP1A | DDX6 | ENSAMEP00000008304 | ENSAMEP00000006421 | Decapping mRNA 1A. | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | 0.993 |
DCP1A | EDC3 | ENSAMEP00000008304 | ENSAMEP00000009436 | Decapping mRNA 1A. | Enhancer of mRNA decapping 3. | 0.993 |
DCP1A | EDC4 | ENSAMEP00000008304 | ENSAMEP00000018559 | Decapping mRNA 1A. | Enhancer of mRNA decapping 4. | 0.993 |
DCP1A | LSM4 | ENSAMEP00000008304 | ENSAMEP00000011741 | Decapping mRNA 1A. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.783 |
DCP1A | NAXE | ENSAMEP00000008304 | ENSAMEP00000015607 | Decapping mRNA 1A. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.828 |
DCP1A | PARN | ENSAMEP00000008304 | ENSAMEP00000011860 | Decapping mRNA 1A. | Poly(A)-specific ribonuclease. | 0.481 |
DCP1A | XRN1 | ENSAMEP00000008304 | ENSAMEP00000013226 | Decapping mRNA 1A. | 5'-3' exoribonuclease 1. | 0.994 |
DCP1B | DCP1A | ENSAMEP00000004378 | ENSAMEP00000008304 | Decapping mRNA 1B. | Decapping mRNA 1A. | 0.992 |
DCP1B | DCP2 | ENSAMEP00000004378 | ENSAMEP00000013264 | Decapping mRNA 1B. | Decapping mRNA 2. | 0.978 |
DCP1B | DDX6 | ENSAMEP00000004378 | ENSAMEP00000006421 | Decapping mRNA 1B. | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | 0.974 |
DCP1B | EDC3 | ENSAMEP00000004378 | ENSAMEP00000009436 | Decapping mRNA 1B. | Enhancer of mRNA decapping 3. | 0.984 |
DCP1B | EDC4 | ENSAMEP00000004378 | ENSAMEP00000018559 | Decapping mRNA 1B. | Enhancer of mRNA decapping 4. | 0.975 |
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