STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U2SURPU2 snRNP associated SURP domain containing. (1029 aa)    
Predicted Functional Partners:
RBM17
RNA binding motif protein 17.
   
 0.987
G1LU40_AILME
Uncharacterized protein.
   
 0.981
DHX15
DEAH-box helicase 15.
   
 0.958
DDX46
DEAD-box helicase 46.
   
 0.929
SF3A2
Splicing factor 3a subunit 2.
    
 0.920
PUF60
Poly(U) binding splicing factor 60.
   
 0.899
SNRPB2
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.898
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
  0.892
SMNDC1
Survival motor neuron domain containing 1.
    
  0.874
PHF5A
PHD finger protein 5A.
   
  0.868
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.