Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U2SURPU2 snRNP associated SURP domain containing. (1029 aa)    
Predicted Functional Partners:
G1LU40_AILME
Uncharacterized protein.
   
 0.998
RBM17
RNA binding motif protein 17.
   
 0.997
SF3A2
Splicing factor 3a subunit 2.
    
 0.994
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.986
SF3B1
Splicing factor 3b subunit 1.
   
 0.983
DHX15
DEAH-box helicase 15.
   
 0.982
PHF5A
PHD finger protein 5A.
   
  0.967
SMNDC1
Survival motor neuron domain containing 1.
    
 0.964
DDX46
DEAD-box helicase 46.
   
 0.956
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 
 0.950
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.