STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS18L1SS18L1 subunit of BAF chromatin remodeling complex. (400 aa)    
Predicted Functional Partners:
DPF1
Double PHD fingers 1.
    
 0.877
DPF2
Double PHD fingers 2.
    
 
 0.876
BCL7C
BAF chromatin remodeling complex subunit BCL7C.
    
 
 0.873
DPF3
Double PHD fingers 3.
    
 0.839
SMARCD1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
   
 0.826
BCL7B
BAF chromatin remodeling complex subunit BCL7B.
    
 
 0.788
ACTL6B
Actin like 6B; Belongs to the actin family.
    
 0.765
PHF10
PHD finger protein 10.
    
 
 0.747
CC2D1B
Coiled-coil and C2 domain containing 1B.
      
 0.746
ARID1B
AT-rich interaction domain 1B.
    
 0.741
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.