Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATM | ATMIN | ENSAMEP00000017701 | ENSAMEP00000014701 | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | ATM interactor. | 0.561 |
ATM | CHEK2 | ENSAMEP00000017701 | ENSAMEP00000008952 | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | Checkpoint kinase 2. | 0.994 |
ATM | RAD18 | ENSAMEP00000017701 | ENSAMEP00000013038 | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | RAD18 E3 ubiquitin protein ligase. | 0.452 |
ATMIN | ATM | ENSAMEP00000014701 | ENSAMEP00000017701 | ATM interactor. | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | 0.561 |
ATMIN | CHEK2 | ENSAMEP00000014701 | ENSAMEP00000008952 | ATM interactor. | Checkpoint kinase 2. | 0.600 |
ATMIN | FIBCD1 | ENSAMEP00000014701 | ENSAMEP00000017180 | ATM interactor. | Fibrinogen C domain containing 1. | 0.535 |
ATMIN | RAD18 | ENSAMEP00000014701 | ENSAMEP00000013038 | ATM interactor. | RAD18 E3 ubiquitin protein ligase. | 0.550 |
ATMIN | RNASEH1 | ENSAMEP00000014701 | ENSAMEP00000019487 | ATM interactor. | Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.535 |
ATMIN | UBR1 | ENSAMEP00000014701 | ENSAMEP00000016548 | ATM interactor. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.532 |
ATMIN | UBR2 | ENSAMEP00000014701 | ENSAMEP00000013607 | ATM interactor. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.585 |
ATMIN | UBR3 | ENSAMEP00000014701 | ENSAMEP00000011029 | ATM interactor. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.529 |
ATMIN | UBR4 | ENSAMEP00000014701 | ENSAMEP00000003127 | ATM interactor. | Ubiquitin protein ligase E3 component n-recognin 4. | 0.534 |
ATMIN | UBR5 | ENSAMEP00000014701 | ENSAMEP00000015670 | ATM interactor. | Ubiquitin protein ligase E3 component n-recognin 5. | 0.656 |
CHEK2 | ATM | ENSAMEP00000008952 | ENSAMEP00000017701 | Checkpoint kinase 2. | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | 0.994 |
CHEK2 | ATMIN | ENSAMEP00000008952 | ENSAMEP00000014701 | Checkpoint kinase 2. | ATM interactor. | 0.600 |
CHEK2 | RAD18 | ENSAMEP00000008952 | ENSAMEP00000013038 | Checkpoint kinase 2. | RAD18 E3 ubiquitin protein ligase. | 0.447 |
FIBCD1 | ATMIN | ENSAMEP00000017180 | ENSAMEP00000014701 | Fibrinogen C domain containing 1. | ATM interactor. | 0.535 |
RAD18 | ATM | ENSAMEP00000013038 | ENSAMEP00000017701 | RAD18 E3 ubiquitin protein ligase. | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | 0.452 |
RAD18 | ATMIN | ENSAMEP00000013038 | ENSAMEP00000014701 | RAD18 E3 ubiquitin protein ligase. | ATM interactor. | 0.550 |
RAD18 | CHEK2 | ENSAMEP00000013038 | ENSAMEP00000008952 | RAD18 E3 ubiquitin protein ligase. | Checkpoint kinase 2. | 0.447 |
page 1 of 2