STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USH2AUsherin. (4570 aa)    
Predicted Functional Partners:
USH2A-2
Laminin N-terminal domain-containing protein.
 
     0.881
WHRN
Whirlin.
    
 
 0.714
PCDH15
Uncharacterized protein.
   
  
 0.702
LAMC1
Laminin subunit gamma 1.
   
0.638
LAMC2
Laminin subunit gamma 2.
   
0.638
LAMC3
Laminin subunit gamma 3.
   
0.638
USH1C
USH1 protein network component harmonin.
    
 
 0.625
CDH23
Cadherin related 23.
   
  
 0.612
USH1G
USH1 protein network component sans.
   
 0.573
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
0.551
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.