Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3 | F12 | ENSAMEP00000007675 | ENSAMEP00000019170 | Complement C3. | Coagulation factor XII. | 0.426 |
C3 | PLG | ENSAMEP00000007675 | ENSAMEP00000016851 | Complement C3. | Plasminogen; Belongs to the peptidase S1 family. | 0.918 |
F12 | C3 | ENSAMEP00000019170 | ENSAMEP00000007675 | Coagulation factor XII. | Complement C3. | 0.426 |
F12 | PLG | ENSAMEP00000019170 | ENSAMEP00000016851 | Coagulation factor XII. | Plasminogen; Belongs to the peptidase S1 family. | 0.923 |
F2R | F2RL3 | ENSAMEP00000019654 | ENSAMEP00000010716 | Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. | F2R like thrombin or trypsin receptor 3; Belongs to the G-protein coupled receptor 1 family. | 0.928 |
F2R | PLG | ENSAMEP00000019654 | ENSAMEP00000016851 | Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. | Plasminogen; Belongs to the peptidase S1 family. | 0.716 |
F2RL1 | PLG | ENSAMEP00000001903 | ENSAMEP00000016851 | F2R like trypsin receptor 1. | Plasminogen; Belongs to the peptidase S1 family. | 0.693 |
F2RL2 | F2RL3 | ENSAMEP00000001895 | ENSAMEP00000010716 | Coagulation factor II thrombin receptor like 2. | F2R like thrombin or trypsin receptor 3; Belongs to the G-protein coupled receptor 1 family. | 0.952 |
F2RL2 | PLG | ENSAMEP00000001895 | ENSAMEP00000016851 | Coagulation factor II thrombin receptor like 2. | Plasminogen; Belongs to the peptidase S1 family. | 0.681 |
F2RL3 | F2R | ENSAMEP00000010716 | ENSAMEP00000019654 | F2R like thrombin or trypsin receptor 3; Belongs to the G-protein coupled receptor 1 family. | Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. | 0.928 |
F2RL3 | F2RL2 | ENSAMEP00000010716 | ENSAMEP00000001895 | F2R like thrombin or trypsin receptor 3; Belongs to the G-protein coupled receptor 1 family. | Coagulation factor II thrombin receptor like 2. | 0.952 |
F2RL3 | PLG | ENSAMEP00000010716 | ENSAMEP00000016851 | F2R like thrombin or trypsin receptor 3; Belongs to the G-protein coupled receptor 1 family. | Plasminogen; Belongs to the peptidase S1 family. | 0.731 |
F3 | PLAT | ENSAMEP00000009834 | ENSAMEP00000005671 | Tissue factor; Initiates blood coagulation by forming a complex with circulating factor VII or VIIa. The [TF:VIIa] complex activates factors IX or X by specific limited proteolysis. TF plays a role in normal hemostasis by initiating the cell-surface assembly and propagation of the coagulation protease cascade. | Plasminogen activator; Belongs to the peptidase S1 family. | 0.720 |
F3 | PLAU | ENSAMEP00000009834 | ENSAMEP00000017635 | Tissue factor; Initiates blood coagulation by forming a complex with circulating factor VII or VIIa. The [TF:VIIa] complex activates factors IX or X by specific limited proteolysis. TF plays a role in normal hemostasis by initiating the cell-surface assembly and propagation of the coagulation protease cascade. | Plasminogen activator, urokinase; Belongs to the peptidase S1 family. | 0.520 |
F3 | PLG | ENSAMEP00000009834 | ENSAMEP00000016851 | Tissue factor; Initiates blood coagulation by forming a complex with circulating factor VII or VIIa. The [TF:VIIa] complex activates factors IX or X by specific limited proteolysis. TF plays a role in normal hemostasis by initiating the cell-surface assembly and propagation of the coagulation protease cascade. | Plasminogen; Belongs to the peptidase S1 family. | 0.608 |
PARD3 | PLG | ENSAMEP00000016552 | ENSAMEP00000016851 | Uncharacterized protein. | Plasminogen; Belongs to the peptidase S1 family. | 0.650 |
PLAT | F3 | ENSAMEP00000005671 | ENSAMEP00000009834 | Plasminogen activator; Belongs to the peptidase S1 family. | Tissue factor; Initiates blood coagulation by forming a complex with circulating factor VII or VIIa. The [TF:VIIa] complex activates factors IX or X by specific limited proteolysis. TF plays a role in normal hemostasis by initiating the cell-surface assembly and propagation of the coagulation protease cascade. | 0.720 |
PLAT | PLAU | ENSAMEP00000005671 | ENSAMEP00000017635 | Plasminogen activator; Belongs to the peptidase S1 family. | Plasminogen activator, urokinase; Belongs to the peptidase S1 family. | 0.547 |
PLAT | PLG | ENSAMEP00000005671 | ENSAMEP00000016851 | Plasminogen activator; Belongs to the peptidase S1 family. | Plasminogen; Belongs to the peptidase S1 family. | 0.917 |
PLAU | F3 | ENSAMEP00000017635 | ENSAMEP00000009834 | Plasminogen activator, urokinase; Belongs to the peptidase S1 family. | Tissue factor; Initiates blood coagulation by forming a complex with circulating factor VII or VIIa. The [TF:VIIa] complex activates factors IX or X by specific limited proteolysis. TF plays a role in normal hemostasis by initiating the cell-surface assembly and propagation of the coagulation protease cascade. | 0.520 |
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