STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHLHE40Basic helix-loop-helix family member e40. (416 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.538
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 
 0.478
CRY1
Cryptochrome circadian regulator 1.
   
 
 0.470
NFIL3
Nuclear factor, interleukin 3 regulated.
    
 0.459
JUN
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
      
 0.443
CRY2
Cryptochrome circadian regulator 2.
   
 
 0.411
PER1
Period circadian regulator 1.
   
 0.411
PER2
Period circadian regulator 2.
   
 0.411
G1MI58_AILME
PAS domain-containing protein.
   
 0.411
EPAS1
Endothelial PAS domain protein 1.
    
 
 0.402
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.