STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB1Damage specific DNA binding protein 1. (1140 aa)    
Predicted Functional Partners:
DDB2
Damage specific DNA binding protein 2.
    
 0.999
DCAF1
DDB1 and CUL4 associated factor 1.
    
 0.999
RBX1
Ring-box 1.
    
 0.999
CUL4B
Cullin 4B; Belongs to the cullin family.
   
 0.998
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.997
CRBN
Cereblon.
    
 0.997
CUL4A
Cullin 4A; Belongs to the cullin family.
   
 0.996
DTL
Denticleless E3 ubiquitin protein ligase homolog.
    
 0.990
DCAF5
DDB1 and CUL4 associated factor 5.
    
 0.986
DDA1
DET1 and DDB1 associated 1.
    
 0.983
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.