STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VITVitrin. (693 aa)    
Predicted Functional Partners:
LOC105240777
Potassium voltage-gated channel modifier subfamily G member 3.
   
 
 0.651
G1LCM0_AILME
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.602
G1MP61_AILME
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.602
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.599
OPTC
Opticin.
    
 0.569
MYOC
Myocilin.
   
 
 0.550
G1LFK6_AILME
PLAC domain-containing protein.
    
 0.535
ADAMTS16
Peptidase M12B domain-containing protein.
    
 0.535
CHL1
Cell adhesion molecule L1 like.
     
 0.533
CREB5
Cyclic AMP-responsive element-binding protein 5; Binds to the cAMP response element and activates transcription.
      
 0.524
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.