Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BLM | BRCA2 | ENSAMEP00000014621 | ENSAMEP00000009909 | BLM RecQ like helicase. | BRCA2 DNA repair associated. | 0.747 |
BLM | DMC1 | ENSAMEP00000014621 | ENSAMEP00000011216 | BLM RecQ like helicase. | Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. | 0.696 |
BLM | G1L0X7_AILME | ENSAMEP00000014621 | ENSAMEP00000000529 | BLM RecQ like helicase. | Uncharacterized protein. | 0.431 |
BLM | G1MF02_AILME | ENSAMEP00000014621 | ENSAMEP00000017931 | BLM RecQ like helicase. | Uncharacterized protein. | 0.861 |
BLM | RAD51 | ENSAMEP00000014621 | ENSAMEP00000017930 | BLM RecQ like helicase. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.861 |
BLM | RAD51B | ENSAMEP00000014621 | ENSAMEP00000015118 | BLM RecQ like helicase. | RAD51 paralog B. | 0.715 |
BLM | RAD51D | ENSAMEP00000014621 | ENSAMEP00000015383 | BLM RecQ like helicase. | RAD51 paralog D. | 0.784 |
BLM | XRCC2 | ENSAMEP00000014621 | ENSAMEP00000014004 | BLM RecQ like helicase. | X-ray repair cross complementing 2. | 0.646 |
BLM | XRCC3 | ENSAMEP00000014621 | ENSAMEP00000019168 | BLM RecQ like helicase. | DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. | 0.885 |
BRCA2 | BLM | ENSAMEP00000009909 | ENSAMEP00000014621 | BRCA2 DNA repair associated. | BLM RecQ like helicase. | 0.747 |
BRCA2 | DMC1 | ENSAMEP00000009909 | ENSAMEP00000011216 | BRCA2 DNA repair associated. | Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. | 0.872 |
BRCA2 | G1L0X7_AILME | ENSAMEP00000009909 | ENSAMEP00000000529 | BRCA2 DNA repair associated. | Uncharacterized protein. | 0.897 |
BRCA2 | G1MF02_AILME | ENSAMEP00000009909 | ENSAMEP00000017931 | BRCA2 DNA repair associated. | Uncharacterized protein. | 0.970 |
BRCA2 | RAD51 | ENSAMEP00000009909 | ENSAMEP00000017930 | BRCA2 DNA repair associated. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.996 |
BRCA2 | RAD51B | ENSAMEP00000009909 | ENSAMEP00000015118 | BRCA2 DNA repair associated. | RAD51 paralog B. | 0.867 |
BRCA2 | RAD51D | ENSAMEP00000009909 | ENSAMEP00000015383 | BRCA2 DNA repair associated. | RAD51 paralog D. | 0.900 |
BRCA2 | WRN | ENSAMEP00000009909 | ENSAMEP00000001717 | BRCA2 DNA repair associated. | 3'-5' exonuclease domain-containing protein. | 0.897 |
BRCA2 | XRCC2 | ENSAMEP00000009909 | ENSAMEP00000014004 | BRCA2 DNA repair associated. | X-ray repair cross complementing 2. | 0.774 |
BRCA2 | XRCC3 | ENSAMEP00000009909 | ENSAMEP00000019168 | BRCA2 DNA repair associated. | DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. | 0.907 |
DMC1 | BLM | ENSAMEP00000011216 | ENSAMEP00000014621 | Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. | BLM RecQ like helicase. | 0.696 |
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