STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBDSSBDS ribosome maturation factor. (250 aa)    
Predicted Functional Partners:
EFL1
Elongation factor like GTPase 1.
  
 
 0.976
RPL11
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.793
RPL37A
Ribosomal protein L37a.
  
   0.791
LOC100482795
Uncharacterized protein.
  
   0.791
LOC109490429
Uncharacterized protein.
  
   0.791
DNAJC21
DnaJ heat shock protein family (Hsp40) member C21.
      
 0.759
G1L3A2_AILME
Ubiquitin-like domain-containing protein.
   
 
 0.733
UBA52
Ribosomal protein L40.
   
 
 0.733
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...]
  
 
 0.728
RPS19
Uncharacterized protein.
   
 
 0.720
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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